Short read mapping for metagenomics

Context

The study of microbial diversity in the oceans is carried out by metagenomic sequencing, followed by data processing via complex bioinformatics pipelines. Mapping is an essential step that can be time-consuming. In collaboration with IUEM(1), Brest, we are currently developing a fast PiM mapping tool dedicated to metagenomics.

(1) Institut Universitaire Européen de la Mer

Work in progress

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