Publications

Workshops

  • D. Lavenier, Protein Alignment on UPMEM PiM Architecture, 1st minisymposium on applications and benefits of UPMEM commercial Massively Parallel Processing-in-Memory Platform, EURO-PAR 2023, Limassol, Cyprus, Aug. 2023 [slides]
  • D. Lavenier, Exploring genomic algorithms on Processing-in-Memory Architecture, Keynote speaker, 5th Workshop on Accelerator Architecture in Computational Biology and Bioinformatics, ISCA 2023, Orlando, Florida, USA, June 2023 [slides]
  • M. Mognol, D. Lavenier, J. Legriel, Parallelization of the banded Needleman & Wunsch algorithm on UPMEM PiM architecture for long DNA sequence alignment, 5th Workshop on Accelerator Architecture in Comutational Biology and Bioinformatics, ISCA 2023, Orlando, Florida, USA, June 2023 [paper]

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